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The CTBR-Bioinformatics resource at Belfer host introductory workshop

On July 14th, 2016 an introductory workshop to the CTBR-sponsored Bioinformatics resource was hosted by the resouce director, Dr. Konstantinos Krampis, and lab members.  The purpose of the workshop was to expose current lab activities and future direction, as well as to provide the audience with information about the automation tools (i.e Galaxy and Docker) and services available to them, including the High Performance Computer Cluster, and the sequencing facility that is well equipped to support various types of jobs.
 

In addition, the workshop highlighted the importance of integrating computational capacity and cross-departmental collaboration to promote and advance research in various fields, including Biology, Chemistry, and Public Health.  It also emphasized the topic of cross departmental collaboration by the inclusion of computer science applications and programming languages.
 


Presentations and workshop resources can be found in the links below.

For more information please contact the lab by writing to:  bioitcore@gmail.com

PRESENTATIONS:
 

An Introduction to High Performance Computing Cluster
Carlos Lijeron
Accessible, Reproducible, and Shareable Bioinformatics Analyses on The Galaxy Project
Thahmina Ali
Hands-On Workshop: Doing Bioinformatics Analyses on Galaxy: Create a Galaxy workflow that identifies SNPs in Exons
Roy Lee, Susie Dong,  Bobby Laungani, Joseph Sayad, Mag Faris, Trami Dang, Kevin Raz, Christina Wu
Visual Omics Explorer: a Cross-Platform Portal for Interactive Data Visualization
Baekdoo Kim

 

GALAXY RESOURCES:
 
Hunter Galaxy Instance
Public Galaxy Instance
Galaxy Toolshed Repository

OTHER RESOURCES:
Visual Omics Explorer platform
Visual Omics Explorer Tutorial Videos
Visual Omics Explorer Publication